2013年6月12日 星期三

Linux ftp folder donwload


Solution:
wget -r ftp://user:pass@server.com/
 
 
 
Reference:  How do you recursively ftp a folder in linux



2013年6月6日 星期四

homozygous and heterozygos

An "allele" does not have zygosity...so it cannot be either hetero- or homozygous. An allele is defined as one of potentially many possibilities at a given location in a genome (a "locus").

A "locus" can be heterozygous or homozygous (among other things), meaning it either has two different alleles, or exactly the same two alleles.

Common SNP terminology is somewhat confusing...based on the acronym one would expect it to refer to a given allele at a specific position, and sometimes it does. However, "SNP" is more often used to refer to a specific base (the "locus") that has multiple possible alleles (for example, a A or a G).

So a heterozygous indel would be one copy of the specific lesion (an insertion or a deletion), the other strand lacking that particular insertion or deletion.

Hopefully that helps, if I didn't understand your question, let me know.


Reference:
http://seqanswers.com/forums/showthread.php?t=1175

Look other: Frequency of homozygous indels vs heterozygous indels

2013年5月28日 星期二

centos open directory in same window

Solution:

choose Edit->Preferences->Behaviour->Always open in browser window.

編輯-> 偏好設定->運作方式->總是以瀏覽視窗開啟

2013年5月10日 星期五

XSLT - eXtensible Stylesheet Language Transformations

1. Description:
Here we demonstrate a simple data.xml, and a showing transformation file of the xslt, then you can using browser to open the data.xml, browser will transform XML into HTML, before it is displayed by a browser.


2.  Code of data.xml
---------------------------------------------------
<?xml version="1.0" encoding="ISO-8859-1"?>
<!-- Edited by XMLSpy® -->
<?xml-stylesheet type="text/xsl" href="data_xslt_test.xsl"?>
<catalog>
    <cd>
        <title>Empire Burlesque</title>
         <artist>Bob Dylan</artist>
         <country>USA</country>
         <company>Columbia</company>
          <price>10.90</price>
          <year>1985</year>
     </cd>
      <cd>
                 <title>Hide your heart</title>
                  <artist>Bonnie Tyler</artist>
                   <country>UK</country>
                    <company>CBS Records</company>
                    <price>9.90</price>
                    <year>1988</year>
      </cd>
</catalog>
---------------------------------------------------
 Be carefully, this data.xml will refereence the style sheet of href="data_xslt_test.xsl"

 ---------------------------------------------------

file of  xslt of data_xslt_test.xsl
 <?xml version="1.0" encoding="ISO-8859-1"?>
<!-- Edited by XMLSpy® -->
<xsl:stylesheet version="1.0" xmlns:xsl="http://www.w3.org/1999/XSL/Transform">

<xsl:template match="/">
  <html>
  <body>
  <h2>My CD Collection</h2>
    <table border="1">
      <tr bgcolor="#9acd32">
        <th>Title</th>
        <th>Artist</th>
      </tr>
      <xsl:for-each select="catalog/cd">
      <tr>
        <td><xsl:value-of select="title"/></td>
        <td><xsl:value-of select="artist"/></td>
      </tr>
      </xsl:for-each>
    </table>
  </body>
  </html>
</xsl:template>


3.  Open the data.xml with firefox
firefox data.xml


Reference:












2013年5月8日 星期三

IE Conditional Comments


Following is from the http://haslayout.net/condcom, more detail can reference it

Overview

IE Conditional Comments (or condcom for short) are special comments that enable authors to use the instructions that only Internet Explorer 5.0 and above on Windows platform will see.

Various types of conditional comments

Regular comment:
<!--This is a comment-->
IE conditional comment:
<!--[if IE]> <![endif]-->
Reversed anti-IE comment:
<!--[if !IE]>--> non-IE HTML Code <!--<![endif]-->
Reversed IE conditional comment (rarely needed):
<!--[if ! lt IE 7]>
    <![IGNORE[--> <![IGNORE[]]>
        Code for browsers that match the if condition
<!--<![endif]-->
In a nutshell, any browser except Internet Explorer on a Windows platform will treat conditional comment as a regular HTML comment. You cannot use condcoms in the CSS code itself. IE conditional comments are useful for hiding or revealing the code to IE, which in turn allows authors to use CSS "hacks" in a more appropriate fashion.



IE9 compatible mode

Problem:
 When you written in web page, if you have some CSS3 code, but the 
 IE9 browser open page using the quirk mode, and you will miss the your style,
 how do you setting the IE9 browser to standard mode??

Solution:
(a)  Before html, you can type the doctype
     <!DOCTYPE html>

(b)  in <head> </head> tag, adding the

<meta http-equiv="X-UA-Compatible" content="IE=EmulateIE9">



Reference:
DOCTYPE & Quirks Mode
Internet Explorer 9 (IE9) 的相容性檢視

2013年4月29日 星期一

Eclipse package meaning


Problem: what do different packages of eclipse like

Indigo
Helios SR1
Helios
Galileo
Ganymede
Europa


Solution: These are code names for major releases of the Eclipse IDE/platform. For example, I think Galileo was Eclipse 3.5. They started relying heavily on the code names about 4-5 years ago, not sure why - it can be confusing post-release.

Helios is the latest stable release. "SR1" means there's been a service release applied (bug fixes).


source: http://in.answers.yahoo.com/question/index?qid=20110121055244AAEgJAj